These Apple Muffins are the perfect treat for any occasion! They’re quick to prepare, full of wholesome ingredients, and bursting with flavor. Whether you’re looking for a delicious breakfast option or a snack for the kids, these muffins check all the boxes. Plus, they freeze beautifully, making them an ideal choice for meal prep!
Why You’ll Love This Recipe
- Quick and Easy: These muffins come together in just one bowl, simplifying your baking experience.
- Wholesome Ingredients: Made with whole wheat flour and fresh apples, they provide a nutritious start to your day.
- Versatile Flavor: The combination of applesauce and cinnamon gives these muffins a delightful taste that everyone will love.
- Freezer-Friendly: Bake a batch ahead of time and store them in the freezer for an easy grab-and-go snack!
- Kid-Approved: Packed with flavor and sweetness from natural ingredients, they’re sure to be a hit with children.
Tools and Preparation
Before diving into the recipe, gather your kitchen tools. Having everything ready will make your baking process smoother.
Essential Kitchen Tools
- Muffin pans (regular or mini)
- Mixing bowls
- Whisk
- Rubber spatula
- Measuring cups and spoons
Why These Tools Matter
- Muffin pans: They ensure even baking and help achieve the perfect muffin shape.
- Mixing bowls: A large bowl is essential for combining ingredients without making a mess.
- Rubber spatula: Ideal for folding in ingredients gently, ensuring your muffins stay light and fluffy.
Ingredients
These apple muffins are quick and easy to make in one bowl! This whole wheat muffins recipe is made with applesauce, fresh apples, and cinnamon. Make a batch for your freezer!
For the Muffins:
- 4 tablespoons unsalted butter (1/4 cup)
- 1/2 cup honey or pure maple syrup
- 1/2 cup unsweetened applesauce
- 1/2 cup plain Greek yogurt
- 1/4 cup milk (dairy, almond, etc.)
- 2 large eggs
- 1 teaspoon vanilla extract
- 1 teaspoon baking soda
- 1/2 teaspoon baking powder
- 1/2 teaspoon salt
- 1 1/2 teaspoons cinnamon
- 1 1/2 cups white whole wheat flour
- 1 large baking apple (chopped; 1 1/2 cups, no need to peel)

How to Make Apple Muffins
Step 1: Preheat the Oven
Preheat your oven to 350 degrees F. Spray muffin pans (regular size or mini) with cooking spray. Coconut oil spray works wonderfully here!
Step 2: Melt the Butter
Place the butter in a large bowl. Melt it in the microwave or on the stove using a pot.
Step 3: Combine Wet Ingredients
Add honey or pure maple syrup, applesauce, plain Greek yogurt, milk, eggs, and vanilla to the melted butter. Whisk everything together until well combined.
Step 4: Mix Dry Ingredients
Add baking soda, baking powder, salt, and cinnamon to the bowl with the wet ingredients. Whisk until everything is incorporated.
Step 5: Add Flour
Stir in white whole wheat flour using a rubber spatula until almost combined—don’t overmix!
Step 6: Fold in Apples
Add chopped apple to the batter. Reserve some pieces for topping if desired. Gently mix until just combined.
Step 7: Fill Muffin Pans
Scoop batter into greased muffin pans until each well is about two-thirds full. If you reserved apple pieces, press them into the tops of each muffin.
Step 8: Bake
Bake regular-size muffins for 16–18 minutes or until a tester inserted into the center comes out clean. Mini muffins will take about 12 minutes.
Step 9: Cool
Allow muffins to cool in the pan for about 10 minutes before transferring them to a wire rack to finish cooling completely.
Step 10: Store
Store any leftover muffins in the refrigerator for up to three days or freeze them for up to three months.
How to Serve Apple Muffins
Apple muffins are a delightful treat perfect for breakfast or a snack. They can be enjoyed on their own or paired with various accompaniments to enhance their flavor and texture.
With Fresh Fruit
- Sliced Bananas: Add a sweet contrast to the cinnamon flavors of the muffins.
- Berries: Fresh blueberries or strawberries add a burst of tartness that complements the muffins beautifully.
With Spreads
- Nut Butter: Almond or peanut butter spreads offer creaminess and protein, making your muffin more satisfying.
- Cream Cheese: A light layer of cream cheese adds richness and tang, balancing the sweetness of the muffins.
With Yogurt
- Plain Greek Yogurt: Top your muffin with Greek yogurt for added protein and a nice creamy texture.
- Flavored Yogurt: Try vanilla or fruit-flavored yogurts for extra sweetness and flavor.
As Part of a Breakfast Platter
- Eggs: Serve alongside scrambled eggs or an omelet for a balanced breakfast.
- Oatmeal: Pair with a small bowl of oatmeal for added fiber and heartiness.
How to Perfect Apple Muffins
To ensure your apple muffins come out perfectly every time, consider these helpful tips.
- Bold Use Fresh Apples: Fresh apples provide moisture and flavor, making your muffins more delicious than using just applesauce.
- Bold Don’t Overmix: Mixing too much can lead to dense muffins; stir until just combined for light and fluffy results.
- Bold Check Doneness Early: Start checking your muffins a couple of minutes before the recommended time to avoid overbaking.
- Bold Cool Properly: Allowing them to cool in the pan briefly before transferring helps maintain their shape.
- Bold Experiment with Spices: Feel free to add nutmeg or ginger for additional warmth and depth of flavor.
- Bold Store Correctly: To keep them fresh, store in an airtight container at room temperature for up to three days.

Best Side Dishes for Apple Muffins
Apple muffins can be complemented by various side dishes that enhance their taste and make your meal complete. Here are some ideas:
- Greek Yogurt Parfait: Layer yogurt with granola and berries for a nutritious side dish.
- Avocado Toast: Serve with smashed avocado on whole grain bread for a savory contrast.
- Cottage Cheese Bowl: A bowl of cottage cheese topped with fruit pairs well with the sweetness of apple muffins.
- Smoothie: A green smoothie can add freshness and nutrients to your meal.
- Chia Seed Pudding: Creamy chia pudding offers healthy fats and fiber, making it a great addition.
- Fruit Salad: A colorful fruit salad brightens up the plate and adds variety to your breakfast spread.
Common Mistakes to Avoid
Making apple muffins can be simple, but avoiding common mistakes will ensure they turn out perfect every time. Here are some pitfalls to steer clear of:
- Bold measurement errors: Not measuring ingredients accurately can lead to dense or overly dry muffins. Always use a kitchen scale or proper measuring cups for precision.
- Bold overmixing the batter: Mixing too much after adding the flour can create tough muffins. Stir gently until just combined for a light and fluffy texture.
- Bold skipping the apple prep: Forgetting to chop your apples properly can result in uneven distribution in the batter. Make sure to cut them into small, evenly sized pieces for consistent flavor.
- Bold ignoring baking times: Each oven is different; relying solely on time can lead to undercooked or burnt muffins. Use a toothpick to check for doneness before the suggested baking time is up.
- Bold not letting them cool: Removing muffins from the pan too soon can cause them to fall apart. Allow them to cool in the pan for about 10 minutes before transferring them to a wire rack.
Storage and Reheating
Refrigerator Storage
- Store apple muffins in an airtight container.
- They will last up to 3 days in the refrigerator.
- Consider lining the container with parchment paper for added freshness.
Freezing Apple Muffins
- Freeze apple muffins in a freezer-safe bag or container.
- They can be stored for up to 3 months.
- Label containers with dates for easy tracking.
Reheating Apple Muffins
- Bold Oven: Preheat your oven to 350°F (175°C) and warm muffins for about 5-10 minutes.
- Bold Microwave: Heat individual muffins on high for about 15-20 seconds or until warm.
- Bold Stovetop: Place muffins in a skillet over low heat, covering them with a lid for about 3-5 minutes until warmed through.

Frequently Asked Questions
Can I make Apple Muffins gluten-free?
Yes, you can substitute white whole wheat flour with a gluten-free blend. Be sure to check that all other ingredients are gluten-free as well.
How do I add more flavor to my Apple Muffins?
You can enhance flavor by adding nuts, raisins, or spices like nutmeg alongside cinnamon. Experiment with these additions based on your taste preferences!
What types of apples work best for Apple Muffins?
Use sweet and tart varieties like Honeycrisp, Granny Smith, or Fuji apples. These types provide great flavor and texture when baked.
Can I use applesauce instead of fresh apples?
Yes! You can increase the amount of applesauce used in place of some fresh apples if you prefer a smoother texture. Just ensure it doesn’t exceed the total apple volume required.
How do I keep my Apple Muffins moist?
Adding yogurt and applesauce helps retain moisture. Make sure not to overbake as this will dry them out.
Conclusion
These apple muffins are not only quick and easy but also versatile enough for any occasion. With their delightful flavors and healthy ingredients, they make a perfect breakfast treat or snack. Feel free to customize with your favorite fruits or nuts, ensuring you’ll enjoy them every time!
Apple Muffins
- Total Time: 33 minutes
- Yield: Approximately 12 servings 1x
Description
Indulge in the delightful flavors of these wholesome Apple Muffins, perfect for any occasion! Whether you’re looking for a quick breakfast or a nutritious snack for your family, these muffins are easy to prepare and packed with goodness. Made with fresh apples, whole wheat flour, and a hint of cinnamon, they offer a satisfying taste that appeals to both kids and adults. Plus, they freeze beautifully, allowing you to enjoy them anytime. Bake a batch today and experience the joy of homemade goodness!
Ingredients
- 4 tablespoons unsalted butter
- 1/2 cup honey or pure maple syrup
- 1/2 cup unsweetened applesauce
- 1/2 cup plain Greek yogurt
- 1/4 cup milk (dairy or plant-based)
- 2 large eggs
- 1 teaspoon vanilla extract
- 1 teaspoon baking soda
- 1/2 teaspoon baking powder
- 1/2 teaspoon salt
- 1 1/2 teaspoons cinnamon
- 1 1/2 cups white whole wheat flour
- 1 large baking apple (chopped)
Instructions
- Preheat the oven to 350°F (175°C) and spray muffin pans with cooking spray.
- Melt the butter in a large bowl.
- Whisk together honey or maple syrup, applesauce, Greek yogurt, milk, eggs, and vanilla into the melted butter.
- Add baking soda, baking powder, salt, and cinnamon; whisk until combined.
- Stir in white whole wheat flour until nearly mixed; avoid overmixing.
- Fold in chopped apple gently.
- Scoop batter into muffin pans until about two-thirds full.
- Bake for 16–18 minutes for regular muffins or 12 minutes for mini muffins until a tester comes out clean.
- Cool in the pan for about 10 minutes before transferring to a wire rack.
- Prep Time: 15 minutes
- Cook Time: 18 minutes
- Category: Breakfast
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin (60g)
- Calories: 150
- Sugar: 10g
- Sodium: 150mg
- Fat: 5g
- Saturated Fat: 3g
- Unsaturated Fat: 2g
- Trans Fat: 0g
- Carbohydrates: 23g
- Fiber: 2g
- Protein: 4g
- Cholesterol: 30mg



